I partenariati cofinanziati includono Paesi dell'Unione Europea e sono basati su un programma concordato dai partner, i quali si impegnano tramite contributi finanziari e in natura. Bandi e valutazioni vengono gestiti a livello centrale; il finanziamento dei progetti selezionati viene effettuato a livello nazionale.
- THCS - European partnership on transforming health and care systems
- PARC - Partnership for the Assessment of Risks from Chemicals
- ERA for Health - Fostering a European Research Area for Health Research
- ERDERA - European Rare Diseases alliance
- One-Health Anti Microbial Resistance - European Partnership for One Health/AMR Antimicrobial Resistance (AMR)
- EP PerMed - European Partnership for Personalised Medicine
- CETP - Clean Energy Transition Partnership
- DUT - European Partnership Driving Urban Transitions
- Biodiversa-plus - Rescuing Biodiversity to Safeguard Life on Earth
- SBEP - A climate neutral, sustainable and productive blue economy Partnership
- Water4All - Water Security for the Planet
- Animal Health & Welfare - European Partnership for Animal health (PAH)
- Agroecology - European Partnership accelerating farming systems transition: agroecology living labs and research infrastructures
- Agriculture of Data - Agriculture of data
- Safe & Sustainable Food System - European Partnership for Safe and Sustainable Food Systems
- InnovativeSMEs - European Partnership on Innovative SMEs